BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005F07LP1|AL425406
(964 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1758 1843 0.0
>3x_Contig1758
Length = 25930
Score = 1843 bits (929), Expect = 0.0
Identities = 954/959 (99%), Gaps = 3/959 (0%)
Strand = Plus / Minus
Query: 1 atgtgtacgaatcgaaaagat-ca-cgcaaagtcagtgtagagttcttatcaatttcttc 58
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 13183 atgtgtacgaatcgaaaagatgcagcgcaaagtcagtgtagagttcttatcaatttcttc 13124
Query: 59 cataaaacctaaagtgtaatacgtgaatctatcgacgacagcgacaccgagttcgacatc 118
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 13123 cataaaacctaaagtgtaatacgtgaatctatcgacgacagcaacaccgagttcgacatc 13064
Query: 119 tgaatggtgagaatacgaactttcgtccagttcactagatccaacagcaattacattggg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13063 tgaatggtgagaatacgaactttcgtccagttcactagatccaacagcaattacattggg 13004
Query: 179 cgaatagaactttgaaaacatagtgttcgcttgacatgtatcaatcataaaaaacaattc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13003 cgaatagaactttgaaaacatagtgttcgcttgacatgtatcaatcataaaaaacaattc 12944
Query: 239 attataacgttttttggcatgcatttgagccaatgcatcggcgatgtcatgactggcaat 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12943 attataacgttttttggcatgcatttgagccaatgcatcggcgatgtcatgactggcaat 12884
Query: 299 ctcctctgcatcttggaacttcaagaaatcttcaccaccatgtccagtcaaataaatgaa 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12883 ctcctctgcatcttggaacttcaagaaatcttcaccaccatgtccagtcaaataaatgaa 12824
Query: 359 aacattggaattctcatcggtcatcaatctctttgatttgggatgatcttcatcccatct 418
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 12823 aacattggaattctcatcg-tcatcaatctctttgatttgggatgatcttcatcccatct 12765
Query: 419 atcagtcaataatctaataaaattctccactgtgacttcataccctctataatccacttc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12764 atcagtcaataatctaataaaattctccactgtgacttcataccctctataatccacttc 12705
Query: 479 gacagactcaccgtatagatccaaagctctatcagcattgttgaacacagaaccggggaa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12704 gacagactcaccgtatagatccaaagctctatcagcattgttgaacacagaaccggggaa 12645
Query: 539 aaggtttcttgggttgcaagcaacatcatcacttaacattaaaatgatttgggaatcagg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12644 aaggtttcttgggttgcaagcaacatcatcacttaacattaaaatgatttgggaatcagg 12585
Query: 599 aatacctaacctcttcaccgtacgatacatactcaagacattggccatgtgtctatagtt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12584 aatacctaacctcttcaccgtacgatacatactcaagacattggccatgtgtctatagtt 12525
Query: 659 gaaccaaaatcttgaggtagagactaacacggcccaattgttggtatgtgtagctgtacc 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12524 gaaccaaaatcttgaggtagagactaacacggcccaattgttggtatgtgtagctgtacc 12465
Query: 719 gatagcttctccaatgacgttagatgccaaacataaaaggaaaaacaacgcctgataacc 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12464 gatagcttctccaatgacgttagatgccaaacataaaaggaaaaacaacgcctgataacc 12405
Query: 779 ccacagcttcatcctaaatacgacaagtatgctgatgctcggtttccgctatccagacga 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12404 ccacagcttcatcctaaatacgacaagtatgctgatgctcggtttccgctatccagacga 12345
Query: 839 tacaaagcttaatatcattcgagaaacattttagtcctgttcatgaacccgaactgctta 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12344 tacaaagcttaatatcattcgagaaacattttagtcctgttcatgaacccgaactgctta 12285
Query: 899 ctatataaatcatgatgtgtattcttaattttgtaaactttaacaaaaagcacmaaaaa 957
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 12284 ctatataaatcatgatgtgtattcttaattttgtaaactttaacaaaaagcaccaaaaa 12226
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7239
Number of Sequences: 1807
Number of extensions: 7239
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 964
length of database: 10,358,551
effective HSP length: 16
effective length of query: 948
effective length of database: 10,329,639
effective search space: 9792497772
effective search space used: 9792497772
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)